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  1. What does 5' and 3' mean in DNA and RNA strands?

    The 5' carbon has a phosphate group attached to it and the 3' carbon a hydroxyl (-OH) group. This asymmetry gives a DNA strand a "direction". For example, DNA polymerase works in a 5' -> 3' direction, that is, it adds nucleotides to the 3' end of the molecule (the -OH group is not shown in diagram), thus advancing to that direction (downwards).

  2. Why is DNA replication performed in the 5' to 3' direction?

    Jan 5, 2012 · 3'->5' activity readily destroys proofreading capability of a polymerase So, basically, it is the need for proofreading that restricts the synthesis of DNA strands to 5'->3'. Why it is so, would need a lot more explanation (if in words) but I think a picture has far better explanatory power than a thousand words.

  3. dna - Are genes on the 5' to 3' strand only? - Biology Stack …

    Aug 26, 2015 · Both strands are have the same polarity but the DNA helix is anti-parallel. Both the strands contain approximately equal number of genes. Sometimes the transcription from both the strands can overlap, leading to production of antisense-transcripts. So RNA polymerase will read the other strand from its 3' to 5'.

  4. Why are transcripts translated from 5' to 3' direction?

    Feb 13, 2014 · Translation can't go into the other direction, it is always in 5' -> 3'. To recognize the right direction (and the right starting point) the Ribisome is not simply starting at the 5`end of the mRNA. Before the start codon AUG the mRNA contains a …

  5. dna - Questions about RNA Polymerase - Biology Stack Exchange

    Feb 4, 2018 · RNA polymerase can only transcribe in one direction (5’ to 3’) with respect to reading one strand of the template DNA in the opposite direction (3’ to 5’). In general, each promoter recruits RNA polymerase to a particular site and indicates in which the direction RNA polymerase will move along the DNA.

  6. dna - Transcription takes place from the 5’ to the 3’ end of the m …

    Apr 13, 2017 · The sense side starts with a 3’ end. This means the corresponding mRNA will have to assemble starting from the 5’ end. This is my initial thought, but can someone expand on it? Also, is this explained by why replication is performed in the 5' to 3' direction as suggested by this thread: Why is DNA replication performed in the 5' to 3 ...

  7. Why is the DNA helix anti-parallel? - Biology Stack Exchange

    Aug 21, 2015 · The 5' refers to the dangling 5' end of the first Phosphate, while the 3' refers to the 3' OH of the Ribose sugar at the last base of the DNA. The entire reaction is catalysed by DNA Polymerase. P.S. They are not really free, there are many modifications which make them inert. So that is why DNA is anti-parallel.

  8. Meaning of 5’–3’ in relation to ORFs - Biology Stack Exchange

    Sep 21, 2020 · DNA and RNA consist of a sugar (ribose) backbone connected by phsophodiester bonds between the 3' and 5' carbon atoms (source for image). Since these are the bond sites that link subunits of nucleic acid together into a single molecule, at either end of any given strand there will be an available bonding site, either the 5' or the 3' carbon.

  9. molecular genetics - How does DNA codon (5`-3`) convert to …

    For example, using the first column with the DNA codon 5`-TAC-3`, I would automatically convert it to 3`-5` complementary anti-sense strand because of the nature of the enzyme. It would be 3`-ATG-5`. Now using that anti-sense strand I would find the complementary base pairs and the mRNA strand would be 5'-UAC-3'. This is not consistent with the ...

  10. How many phosphates are in the 5' end of a DNA strand?

    Mar 2, 2019 · The DNA polymerase can only extend a primer and therefore almost all lifeforms have a primase (which is a type of RNA polymerase) that synthesizes RNA primers at the replication origins that the DNA polymerase can extend. As you guessed, the 5' end would indeed have a triphosphate. Organism Template Sequence Primer Synthesized

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